miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|53783881|gb|CV501524.1|CV501524 CACTACAACGCGATGGAGGCAACCAAAGCAGTCAAGCCACTACTCGGAGACTACTACCAATTCGATGGAACCCCGATTTT
CAAGGCAATGTGGAGGGAAGCTAAAGAGTGTCTCTACGTCGAGAAAGACGAATCATCTCAAGGCAAAGGTGTCTTCTGGT
ACAAAAACAAGCTCTGAAATACTAGAACAGAAACTCAGCTTGCTTTGAATTGGTCTTTTGGTAATGTTTGGTCAGTGTCT
TGAGTAAGTATTTTGGATTTAAGTTAATTTAGCTAATGTGTTGTCTTTGTTAGTAAGGGGAGGTTTATGTTTGATGAAAT
TTTTGATAAATAAAGGGGAAAATTTTTAGAAAAATATAAAGAGGATTAAAGTGCGTTCTCCACCTCCTCTTAGTTTGTAA
TGAACTACCAGTTTTAATATCAGTGGTTGTGTTTGTGTCTAAAAAAAAAAAAAAAAAA




Most similar to sp|Q39287|FAD6E_BRAJU

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q39287|FAD6E_BRAJU Omega-6 fatty acid desaturase, endoplasmic
           reticulum OS=Brassica juncea PE=2 SV=1
          Length = 384

 Score =  103 bits (257), Expect = 4e-22
 Identities = 44/58 (75%), Positives = 49/58 (84%)
 Frame = +1

Query: 1   HYNAMEATKAVKPLLGDYYQFDGTPIFKAMWREAKECLYVEKDESSQGKGVFWYKNKL 174
           HY+AME TKA+KP+LGDYYQFDGTP  KAMWREAKEC+YVE D   + KGVFWY NKL
Sbjct: 327 HYHAMEVTKAIKPILGDYYQFDGTPWVKAMWREAKECIYVEPDRQGEKKGVFWYNNKL 384